Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948505.1_cds_XP_016489755.1_80242
CDS Infomation

[gene=LOC107809610] [db_xref=GeneID:107809610] [protein=AAA-ATPase At3g50940-like] [protein_id=XP_016489755.1] [location=join(63078..63663,63852..64228,64542..65096)] [gbkey=CDS]
Sequence

ATGTACGACGTCTCAAAAATGCAGAACACAGCATCAACCTTATTCTCGGCGTACGCTTCT
TTAGCAGCGTCAATGATGCTTGTTCGCACCATGGCTAACGATCTCATCCCTAAATCCCTT
CTCACTTACATCCAATCAGCTATAAGTTATCTCTTCACTCCGCTTTCTAGCCAGCTCACT
ATCATCATCGACGAACAGTGTGGTATGACCAGAAACCAAGTGTACGAGGCCGCCGAAATT
TACCTTCGTACAAAGATCGGCCCTAACGCTGACCGAGTCCGTGCCCACAAAACCCCTAAA
CAGAAAAACATCAACGTTAGCATAGAGAAGGATGAAGAGATCAGTGATGTATACGGCGTC
GTACAGTTGAAATGGAAATTGGTTTCTGTTGAGCCTCAAGACCGAAGTTATACCCCAGAA
AAAAGATTCTTTGAGCTCAGTTTTAATAAGAAGTTTAAAGAAAGTGTGTTGAATGAGTAT
TTACCTTTTGTGTTGACTAAGGCTAAGGAAATTCAAGATAATGATAGGGCTGTGAAATTG
TACACTAGGGATTGTCCTTGTGGCAGTGATGAAGATGGGTATGGGTGGGGTTCAATAAAC
TTGGACCATCCTGCTACTTTTGATACTTTGGCTATGGAACCTGATATGAAAAAGATGATA
ATTGAAGATCTTGATAGATTTGTGAAAAGGAGAGATTTTTATAAAAAAGTTGGTAAGGCT
TGGAAAAGAGGGTATCTTTTATATGGACCTCCAGGAACTGGGAAATCTAGCTTGATTGCT
GCCATGGCCAATTACTTGAAGTTTGATATTTATGATTTGGAACTTACTAGTTTGTATTCT
AACTCGGAATTAAGAAGGATTTTGATCTCTACTTCGAACCGATCTATTATTGTGATTGAA
GATATTGATTGTAGTGTGGAAATGCACGATCGAAATCTTGGGCATCAACCCGCTGACACT
AAGTTAACGTTATCTGGTTTGTTGAACTTCATTGATGGATTGTGGTCCAATTGTGGGGAC
GAAAGAATTATTGTATTCACAACCAACCGTAAGGAGAAATTAGATCCAGCACTATTGAGA
CCTGGTCGAATGGATATGCATATTCATATGTCCTATTGTACTAATCAGAGTTTCAAGATT
CTGGCTTTTAACTACCTAGGCATCCGTGACCATAGACTATTCCTGGAAATTGAAGGCCTA
ATCAAGAATGTAGAGGCAACCCCTGCAGAAATTGCAGAGGAACTCATGAGAAGTGAGGAT
GCTGATGTTGTTCTTGAGGGAGTGGTTAATTTGCTCAAGCGAAAAGCCGATGAAGCCAAT
CGAATCAAGGACGAGAAGAGTCCAAGCACCCCAGAAGACGATGAGAAGGACGAGATTGAG
GAAGAAAAGGTTGATGAAGGTGAAATTCAAGAAGCTAAAAGATTGAGAACTGAAATGTTG
TTACATACTTTGAGAAACCAAAGGAGAGGAAGAATGAGAATTGGAAGACCGAACAGAGGA
AGAAGAGGTCGTTGGTGA

Peptide Sequence

PEP ID

XP_016489755.1
PEP Infomation

PREDICTED: AAA-ATPase At3g50940-like [Nicotiana tabacum]
Sequence

MYDVSKMQNTASTLFSAYASLAASMMLVRTMANDLIPKSLLTYIQSAISYLFTPLSSQLT
IIIDEQCGMTRNQVYEAAEIYLRTKIGPNADRVRAHKTPKQKNINVSIEKDEEISDVYGV
VQLKWKLVSVEPQDRSYTPEKRFFELSFNKKFKESVLNEYLPFVLTKAKEIQDNDRAVKL
YTRDCPCGSDEDGYGWGSINLDHPATFDTLAMEPDMKKMIIEDLDRFVKRRDFYKKVGKA
WKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLELTSLYSNSELRRILISTSNRSIIVIE
DIDCSVEMHDRNLGHQPADTKLTLSGLLNFIDGLWSNCGDERIIVFTTNRKEKLDPALLR
PGRMDMHIHMSYCTNQSFKILAFNYLGIRDHRLFLEIEGLIKNVEATPAEIAEELMRSED
ADVVLEGVVNLLKRKADEANRIKDEKSPSTPEDDEKDEIEEEKVDEGEIQEAKRLRTEML
LHTLRNQRRGRMRIGRPNRGRRGRW

Transcript Sequence

Gene sequence data has not been registered.